1. Introduction to Phylogenetics
2. Genetic Distance and ML tree by MEGA
3. Multiple Sequence Alignment by MAFFT
4. Bayesian Inference by MrBayes
5. Parsimony tree by PAUP
6. Data Concatenation and Format Conversation by Using Mesquite and PAUP
7. Bayesian Inference and Molecular Dating by BEAST
8. Phylogenetic Tree Presentation by Figtree
9. Nucleotide Substitution Model by jModelTest
10. DNA Sequence Polymorphism by DNASp
11. Barcoding Gap, Species Delimitation and Partitioning by TaxI2, ABGD, ASAP 
12. Web Based Phylogenetic Analysis